Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921645.1_cds_XP_016470541.1_62980
CDS Infomation

[gene=LOC107792817] [db_xref=GeneID:107792817] [protein=zinc finger CCCH domain-containing protein 34-like isoform X2] [protein_id=XP_016470541.1] [location=join(18519..18603,18704..18849,19123..19203,20154..20273,20427..20759,20853..21170,24019..24414)] [gbkey=CDS]
Sequence

ATGGAGAGGTACAGTGGGACCCAGGCAATGGAGGGTGCTCCGGTGTCGGAATGGACTTCT
CCCGGCGGCGATACTGGGCTCGAAGAGGCTATGTGGCAGTTGTCGGTGGGAAGTGGCCCA
GAATCGTACCCTGAACGGCCCAACGAGGCCGATTGTATTTATTATTTGAGGACGGGTTTC
TGTGGCTATGGCTCTCGCTGTCGGTTCAATCATCCTCCCGATCGTAATTTGGTTATGGGA
GCTGCGAGAGCTATCGGAGGAGGAGGAGGAGAAGGAGAATACCCCGAAAGAGTGGGTCAA
CCTGTTTGCCAGTACTATATGAGGACGGGGATGTGTAAATTTGGTGCTTCCTGCAAATAT
CACCATCCAAGACAGGGAGGTGGATCTCCAGCCCTGATGACACATAACATTTATGGATAC
CCACTGCGACCGGGTGAAAAGGAATGTTTGTTCTATATGAAAACAGGGCAGTGTAAATTT
GGCATCACCTGTAAATTTCACCATCCACAGCCAGCTGGTGTGCAAGTGCCAGCATCAGCA
GCTAGACCTGGAGCTTTTCCTTTGCCAGCGGCTGTTCCCCCACCAGCCACTTATCCAACA
GTGCAATCTCCTTCTGTTCAATCAGCTCAACAATATGGAGTGATTGCTGGCAACTGGCCG
GTTGTGAGGCCTACTCTGCTTCCAGGTTCCTATCTTCCTGGCACATACGGCCCTATGCTT
TTCCCCCCTGGGATGGTTCCTGTGCCAGGTTGGACTCCTTATCCGGCATCTGCTAGTCAA
TTGCCCTCCCTAACTACTCAGCCTGCTGCTGGAGCAGGTCCAGTTTATGGGCTTACGCAA
CTCTCTGCATCAGCACCTTCCTACATGGGACCGCACACGTCTCTTACTGCTTCTATAGGT
CCTTCAGGCAGCATCCAGAAGGAACATGCGTTCCCAGAAAGGCCTGGGCAACCTGAATGT
CAGTATTACATGAAGTATGGGGATTGCAAATTTGGATCTTCATGTAGATACCATCATCCA
CCTGAGTGGAGTGGACCAAAATCAGGTTTTATCCTTAGTGCGATGGGTCTTCCTCTTCGT
CCTGGTGCACCAATTTGCTCTCACTATTCACAAAATGGAGTGTGCAAATTTGGACCTTCT
TGCAAGTTTGACCATCCAATGGGAATAAGCTATAGTCCCTCGGCATCTTCTCTCGTTGAT
ATGCCAGTTGCGCCTTACCCTGTGGGATCTTCTGTTGGTACTTTGGCTCCATCCTCCTCG
TCCTCAGATTTGAAGCCCGAACTTGTATCTGGATCCACCAAGGATGCCTTCTCTACCCAA
ACGTCTTCTATGAGCACTTCAAGCGGTTCAGTTGGTTCAATGTTCTCAAAGGGTGGTCCT
GTTTCTCATTCTGGTGCTCAACAGTCTATACAGAGTTCTACCTCTTCCAGTGGCAGCAGC
AGTACAGGTTGCGATGGTGAGGCTCAAACATCAAGTTGA

Peptide Sequence

PEP ID

XP_016470541.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 34-like isoform X2 [Nicotiana tabacum]
Sequence

MERYSGTQAMEGAPVSEWTSPGGDTGLEEAMWQLSVGSGPESYPERPNEADCIYYLRTGF
CGYGSRCRFNHPPDRNLVMGAARAIGGGGGEGEYPERVGQPVCQYYMRTGMCKFGASCKY
HHPRQGGGSPALMTHNIYGYPLRPGEKECLFYMKTGQCKFGITCKFHHPQPAGVQVPASA
ARPGAFPLPAAVPPPATYPTVQSPSVQSAQQYGVIAGNWPVVRPTLLPGSYLPGTYGPML
FPPGMVPVPGWTPYPASASQLPSLTTQPAAGAGPVYGLTQLSASAPSYMGPHTSLTASIG
PSGSIQKEHAFPERPGQPECQYYMKYGDCKFGSSCRYHHPPEWSGPKSGFILSAMGLPLR
PGAPICSHYSQNGVCKFGPSCKFDHPMGISYSPSASSLVDMPVAPYPVGSSVGTLAPSSS
SSDLKPELVSGSTKDAFSTQTSSMSTSSGSVGSMFSKGGPVSHSGAQQSIQSSTSSSGSS
STGCDGEAQTSS

Transcript Sequence

Gene sequence data has not been registered.